开发了一种能够处理NMR图像的算法,用于使用机器学习技术来分析以检测脑肿瘤的存在。
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The number of international benchmarking competitions is steadily increasing in various fields of machine learning (ML) research and practice. So far, however, little is known about the common practice as well as bottlenecks faced by the community in tackling the research questions posed. To shed light on the status quo of algorithm development in the specific field of biomedical imaging analysis, we designed an international survey that was issued to all participants of challenges conducted in conjunction with the IEEE ISBI 2021 and MICCAI 2021 conferences (80 competitions in total). The survey covered participants' expertise and working environments, their chosen strategies, as well as algorithm characteristics. A median of 72% challenge participants took part in the survey. According to our results, knowledge exchange was the primary incentive (70%) for participation, while the reception of prize money played only a minor role (16%). While a median of 80 working hours was spent on method development, a large portion of participants stated that they did not have enough time for method development (32%). 25% perceived the infrastructure to be a bottleneck. Overall, 94% of all solutions were deep learning-based. Of these, 84% were based on standard architectures. 43% of the respondents reported that the data samples (e.g., images) were too large to be processed at once. This was most commonly addressed by patch-based training (69%), downsampling (37%), and solving 3D analysis tasks as a series of 2D tasks. K-fold cross-validation on the training set was performed by only 37% of the participants and only 50% of the participants performed ensembling based on multiple identical models (61%) or heterogeneous models (39%). 48% of the respondents applied postprocessing steps.
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即使在高度发达的国家,多达15-30%的人口只能理解使用基本词汇编写的文本。他们对日常文本的理解是有限的,这阻止了他们在社会中发挥积极作用,并就医疗保健,法律代表或民主选择做出明智的决定。词汇简化是一项自然语言处理任务,旨在通过更简单地替换复杂的词汇和表达方式来使每个人都可以理解文本,同时保留原始含义。在过去的20年中,它引起了极大的关注,并且已经针对各种语言提出了全自动词汇简化系统。该领域进步的主要障碍是缺乏用于构建和评估词汇简化系统的高质量数据集。我们提出了一个新的基准数据集,用于英语,西班牙语和(巴西)葡萄牙语中的词汇简化,并提供有关数据选择和注释程序的详细信息。这是第一个可直接比较三种语言的词汇简化系统的数据集。为了展示数据集的可用性,我们将两种具有不同体系结构(神经与非神经)的最先进的词汇简化系统适应所有三种语言(英语,西班牙语和巴西葡萄牙语),并评估他们的表演在我们的新数据集中。为了进行更公平的比较,我们使用多种评估措施来捕获系统功效的各个方面,并讨论其优势和缺点。我们发现,最先进的神经词汇简化系统优于所有三种语言中最先进的非神经词汇简化系统。更重要的是,我们发现最先进的神经词汇简化系统对英语的表现要比西班牙和葡萄牙语要好得多。
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背景:基于学习的深度颈部淋巴结水平(HN_LNL)自动纤维与放射疗法研究和临床治疗计划具有很高的相关性,但在学术文献中仍被研究过。方法:使用35个规划CTS的专家划分的队列用于培训NNU-NEN 3D FULLES/2D-ENEBLEN模型,用于自动分片20不同的HN_LNL。验证是在独立的测试集(n = 20)中进行的。在一项完全盲目的评估中,3位临床专家在与专家创建的轮廓的正面比较中对深度学习自动分类的质量进行了评价。对于10个病例的亚组,将观察者内的变异性与深度学习自动分量性能进行了比较。研究了Autocontour与CT片平面方向的一致性对几何精度和专家评级的影响。结果:与专家创建的轮廓相比,对CT SLICE平面调整的深度学习分割的平均盲目专家评级明显好得多(81.0 vs. 79.6,p <0.001),但没有切片平面的深度学习段的评分明显差。专家创建的轮廓(77.2 vs. 79.6,p <0.001)。深度学习分割的几何准确性与观察者内变异性(平均骰子,0.78 vs. 0.77,p = 0.064)的几何准确性无关,并且在提高水平之间的准确性方面差异(p <0.001)。与CT切片平面方向一致性的临床意义未由几何精度指标(骰子,0.78 vs. 0.78 vs. 0.78,p = 0.572)结论:我们表明可以将NNU-NENE-NET 3D-FULLRES/2D-ENEMELBEND用于HN_LNL高度准确的自动限制仅使用有限的培训数据集,该数据集非常适合在研究环境中在HN_LNL的大规模标准化自动限制。几何准确度指标只是盲人专家评级的不完善的替代品。
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可以使用具有快速有效分割网络的深度学习方法来实施医疗图像分割。单板计算机(SBC)由于内存和处理限制而难以用于训练深网。诸如Google Edge TPU之类的特定硬件使其适合使用复杂的预训练网络进行实时预测。在这项工作中,我们研究了两个SBC的性能,具有和不进行硬件加速度进行底面图像分割,尽管这项研究的结论可以通过其他类型的医学图像的深层神经网络应用于分割。为了测试硬件加速的好处,我们使用先前已发布的工作中的网络和数据集,并通过使用具有超声甲状腺图像的数据集进行测试来概括它们。我们在SBC中测量预测时间,并将其与基于云的TPU系统进行比较。结果表明,使用Edge TPU,机器学习加速SBC的可行性可加速光盘和杯赛分段,每图像可获得低于25毫秒的时间。
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